Repair inconsistent genomic interval enrichment counts
Repair inconsistent genomic interval enrichment counts: a task in SWE-bench-Science (Harbor dataset). Inspect the BEDTools source tree and the public reproduction workflow. A small genomic interval-enrichment analysis becomes unstable when the database/background interval set is augmented with…
The task
Inspect the BEDTools source tree and the public reproduction workflow. A small genomic interval-enrichment analysis becomes unstable when the database/background interval set is augmented with valid intervals that cannot overlap the query intervals.
Part of OpenMOSS-Team/SWE-bench-Science.