Repair control-referenced relative responses in a single-cell perturbation workflow

Repair control-referenced relative responses in a single-cell perturbation workflow: a task in SWE-bench-Science (Harbor dataset). I am analyzing a single-cell perturbation data set with the D-SPIN framework (using the supplied source under source/ ). I trained a model and saved the inferred…

The task

I am analyzing a single-cell perturbation data set with the D-SPIN framework (using the supplied source under `source/`). I trained a model and saved the inferred perturbation response vectors to `fixtures/public/model_responses.npz`; the sample metadata table — which sample is a control, and which batch each sample…

Part of OpenMOSS-Team/SWE-bench-Science.