You are a bioinformatics analyst tasked with processing genomic alignments to prepare data for three…
You are a bioinformatics analyst tasked with processing genomic alignments to prepare data for three…: a task in SkillNet-Gym (Harbor dataset). You have been provided with an aligned BAM file reads.bam and a reference genome reference.fa . The reference index 1000 Genomes GRCh37 reference FASTA…
The task
You have been provided with an aligned BAM file `reads.bam` and a reference genome `reference.fa`. The reference index `1000_Genomes_GRCh37_reference_FASTA_index.fai` is available in the input directory.
Part of zjunlp/SkillNet-Gym.